Browse of TCMCG011C09092 protein

CDS

Accession Number	TCMCG011C09092
gbkey	CDS
Protein Id	XP_021893401.1
Location	complement(join(103288..103884,104370..104794,104797..105209,105653..105793,106587..106858,106933..107131,107980..108182,109849..110057,110372..110519,110620..111018,111258..111476,111581..111728,111884..111948))
Gene	LOC110811280
GeneID	110811280
Organism	Carica papaya

Protein

Length	1146aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA264084
db_source	XM_022037709.1
Definition	LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 1-like [Carica papaya]

EGGNOG-MAPPER Annotation

COG_category	K
Description	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC	-
KEGG_Module	M00182        [VIEW IN KEGG]
KEGG_Reaction	R00435        [VIEW IN KEGG] R00441        [VIEW IN KEGG] R00442        [VIEW IN KEGG] R00443        [VIEW IN KEGG]
KEGG_rclass	RC02795        [VIEW IN KEGG]
BRITE	br01611        [VIEW IN KEGG] ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K02999        [VIEW IN KEGG]
EC	2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00230        [VIEW IN KEGG] ko00240        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko03020        [VIEW IN KEGG] map00230        [VIEW IN KEGG] map00240        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map03020        [VIEW IN KEGG]
GOs	GO:0000428        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005736        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0030880        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044452        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0055029        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0061695        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCACATGTGGTTCGTGTTTTAAAGGGGGAAAAGACAATACGTATGCACTATGCAAATTGCAGCACATATAATGCTGATTTTGATGGCGACGAAATGAATGTTCATTTCCCACAAGATGAAATTTCTCGTGCTGAGGCCTATAACATTGTTAATGCAAATAATCAGTATGTCAGGCCTTCCAGTGGTGAACCACTTAGAGCGTTAATTCAGGATCATATCGTAAGTGCTGCTCTCCTGACTAAGAAGGACACTTTCTTAAATCGAGAAGAATTTAATCAGCTTTTGTACAGCTCAGGTGTGTCTGTTGTTGGATTAGGTTCTGCTTCTGGAAAACCTGGCAAGAAAGTTTCTATATGGAGCTCAGAAGGAGACATGCTTCCTATTCTTCCTGCAATCTGGAAGCCAAAGCCTCTGTGGACAGGAAAGCAGGTTATTACTGCTGTGCTAAATCACATAACTAAAGGGTGCCCGCCATTCACTGTTGAGAAAGCTGGGAAACTTCCACGGGACTTTTTCAAAAGTAAATCAATTGAAAATGTGATGAGCAAGAGAAAATGGAATGACAAAGATAAAGTGATGAAAAAGAAACAGAAATCTGTGTATACACTCAGCAAGGAAAGAGAGTGTGCAGACGAAAATGAATCAGAGAAGTTAGTGGATAATGAAGATAAGCTGTTAATCTATAAAAACGATTTTGTGCGAGGTGTGATTGATAAGGCTCAGTTTGCTGATTATGGTCTGGTTCATACGGTACAAGAGCTCTATGGCTCAAATACTGCAGGACTTTTTCTCTCTGCATTGAGTCGTCTGTCCACTGTTTTCCTGCAGATGCGGCATGGACTCACTTGTGGATTAGATGATCTTTTGATAAAGAAAGATAAGGACGATGCAAGAACAAGGCAACTAGAAGAGTGTGATCATATTGGTGAGAAAGTACTTTGTAAAGCTCTTGGAATTAAAGCTGAAGCTAAAATAGACCCAAAGGAATTAAAATCAAAAATTGAAAGAACTATATGTAGTGATGGCGATGCTGCCTTGACATCCTTGGATAGGAGCATTGTGAATGAACTGAATCAATGTACAAGCAAGGGTATTATGAATGAGTTGTTATCTGAGGGGTTGTTGAAGCCCACTGGAAAGAACTGGATATCTCTTATGACTACATCAGGGGCTAAAGGTAGTAAGGTTAATTTCCAACAAATATCTTCACATTTGGGACAGCAAGAATTGGAAGGAAAGCGAGTCCCTCGAATGGTTTCTGGAAAGACATTACCCTGCTTCCATCCTTGGGATTGGGCCCCAAGAGCTGGGGGGTTTATTAGTGATCGCTTTCTTACTGGTCTTCGTCCTCAAGAATATTATTTCCATTGCATGGCTGGGCGTGAAGGGTTAGTTGACACTGCTGTCAAAACATCCCGCAGTGGATACCTACAAAGATGCTTAATAAAAAATCTTGAGAGCCTGAAGGTGAGTTATGATTATACAGTCCGTGATGCTGATGGTTCGATAATTCAATTCCAATATGGAGAAGATGGTGTGGATGTTCATCGGACAAGCTTTATTGCAAAGTTCAAAGAACTGACAGCTAATCAAGATATGATCCTCGAAGCATGTGGTCGGGGGACGACCTTTGATACTTCGAATCATTATATAACGGAATTGCCCTCTGCTCTTAAGAAGAAAGCTGAGAAATTTGTGAAGGAACTCCCCTTAAATGACCGAGTTGCTCTGAATTTAGTCAAACAAGAGGAACTCTTGAAGTTATTGAAGTCCAGATTCCTCTCAAGTCTTGCCCAGCCAGGGGAGCCAGTTGGTGTACTTGCTGCCCAGTCTGTAGGGGAACCTTCGACGCAAATGACGTTGAACACTTTCCATCTTGCTGGACGAGGTGAAATGAATGTCACACTGGGAATTCCTCGCCTACAGGAAATCTTGATGACTGCTTCGAATGATCTCAAAACTCCAATAATGACATGCCCTTTGCGAGAGGGGAGAACAAAGGAGGACGCAAACCGTCTTGCTGATAGATTGAGAAAAATTGCGGTAGCAGACATAATAGAGAGGATGGAAGTATCTGTTGTACCTTTTGCCATTCAAGACAACCAAATATGCAGTATTCATAAGCTTAAGATGAAACTGTACAAACCTGAACACTATCCAGAGTACACAGATATTTCAGTTGAAGACTGGGAAGATACCTTGCAGATTTCGTACTTGAGGGAGCTGGAGGATGCCATACAAAATCATCTGGTTTTGCTCTCTAGAATCAGTGGTATAAAGAATTTTTATGCCCGGACTCACGACCAAAGGGCTTCAAATGAGACTGATGAAGATTTTTCTGCCAGTGAATCACGGCGTGTGGAAGATGATGATGATTCTGGTGATGACGATGTTCAAGACGTTGAGGACCTTGCAGATGCACAAAAGCGGAAAAAACAAATTCCAGATGAGATGGACTATGAAGATGGTTCTGAAGAGGAAATTAATGAAGAATCTCTCATGTTAGAGTTGAAGGCGACAATTCTGACATTGAGAACGAGGATGAGATTGAAATTAGCAAGGATGATATCATCGAGTTACGGGATGGTAAGGGTGAGGTCTCTAAAAGTTCAGTAAAACCATCAAAGGATGATGCCTTTGAAAGTCAACTGTCTGAAAAACCCTCCCAAGTCAAAGTCACGAGCTGAAAAGACCAAATCAGAAACCAAAAGAACAAAGAAAGTCAAAGCCAAATTTTTCAAGAAGGAAACAGATCGTGCAGTTTTTATAGAAGCCAAGGGATTAGAGTTTGAGGTCCATTTTAAATTTGTCAACGAACCTCATATTCTGCTAGCTCAGATTGCTCAGAAGACAGCAAAGAAGGTTTACATACAGAACTCTGGAAGAATTGAGCGATGTCAAGTGGGCGATTGCAGTGATGGTCAGGTGATTTACTATGGAAAAGATCCAAAGGATAGAAAAGATATCAAGACCGAAGACAAGAAATCAATTCCGGCACTGAATGCAGCCGGAATAGATTTAGTTTCCTTCTGGCAATTGCAAGATCACCTTGATGTCAGGTACATATATTGCAACAGCGTACATGCTATGCTAAATACATATGGGGTGGAAGCGGCTAGAGAGACCATCATCAGGGAGATAAATCACGTTTTCAAGTCTTACGGGATTTCTGTGAATATCCGGCACCTGACGCTCATTGCTGACTACATGACGCACACAGGGGGTTATCGTCCCATGAGTAGACTTGGGGGCATAGCAGATTCTACATCACCATTTGCTAAAATGTCTTTTGAGACCGCATCCAAGTTCATCCTCCATGCATCTCAGTATGGGGAGGCAGACAACTTGGAGACTCCTTCAGCCAGAATCTGTCTCGGGTTGCCAGTGAAAATGGGCACTGGATGTTTCGACTTGATGCAAAAATTGGAAGTCTAA

Protein:   MAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVRPSSGEPLRALIQDHIVSAALLTKKDTFLNREEFNQLLYSSGVSVVGLGSASGKPGKKVSIWSSEGDMLPILPAIWKPKPLWTGKQVITAVLNHITKGCPPFTVEKAGKLPRDFFKSKSIENVMSKRKWNDKDKVMKKKQKSVYTLSKERECADENESEKLVDNEDKLLIYKNDFVRGVIDKAQFADYGLVHTVQELYGSNTAGLFLSALSRLSTVFLQMRHGLTCGLDDLLIKKDKDDARTRQLEECDHIGEKVLCKALGIKAEAKIDPKELKSKIERTICSDGDAALTSLDRSIVNELNQCTSKGIMNELLSEGLLKPTGKNWISLMTTSGAKGSKVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFHPWDWAPRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFQYGEDGVDVHRTSFIAKFKELTANQDMILEACGRGTTFDTSNHYITELPSALKKKAEKFVKELPLNDRVALNLVKQEELLKLLKSRFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASNDLKTPIMTCPLREGRTKEDANRLADRLRKIAVADIIERMEVSVVPFAIQDNQICSIHKLKMKLYKPEHYPEYTDISVEDWEDTLQISYLRELEDAIQNHLVLLSRISGIKNFYARTHDQRASNETDEDFSASESRRVEDDDDSGDDDVQDVEDLGXDAQKRKKQIPDEMDYEDGSEEEINEESLMLELKATILTLRTRMRLKLARMISSSYGMVRVRSLKVQXNHQRMMPLKVNCLKNPPKSKSRAEKTKSETKRTKKVKAKFFKKETDRAVFIEAKGLEFEVHFKFVNEPHILLAQIAQKTAKKVYIQNSGRIERCQVGDCSDGQVIYYGKDPKDRKDIKTEDKKSIPALNAAGIDLVSFWQLQDHLDVRYIYCNSVHAMLNTYGVEAARETIIREINHVFKSYGISVNIRHLTLIADYMTHTGGYRPMSRLGGIADSTSPFAKMSFETASKFILHASQYGEADNLETPSARICLGLPVKMGTGCFDLMQKLEV